PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do003647.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 243aa    MW: 25015.1 Da    PI: 6.5736
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do003647.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.67.6e-15187235351
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                 + +r++r++kNRe+A rsR+RK+a+i+eLe  v +Le+eN +L  e ee
  Do003647.1 187 AMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAELLREQEE 235
                 689*************************************998877665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.7E-5185243IPR004827Basic-leucine zipper domain
PfamPF001701.7E-13187235IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.76187235IPR004827Basic-leucine zipper domain
CDDcd147072.51E-19189239No hitNo description
SuperFamilySSF579591.44E-10190237No hitNo description
Gene3DG3DSA:1.20.5.1703.4E-13190235No hitNo description
PROSITE patternPS000360192207IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MASSRVMPSS SPSHTASDLA RFAQAASRPG GGGGSGLGSM NVEELLRGIY GDMPTPALPA  60
TGADRPMPPA PAPAPEIAAR KTAEQVWKEI TAGGGSGGTA APVAQAVVPA GAGGGAGAGG  120
PEMTLEDFLA REGAVREDDV RVSGPSAPAE GPVVMGFLGG AEGVGVAGGG GGRGRKRQLM  180
DPVDRAAMQR QKRMIKNRES AARSRERKQA YIAELESLVT QLEEENAELL REQEERHQKR  240
LKE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002458823.11e-105hypothetical protein SORBIDRAFT_03g040970
TrEMBLA0A0A9RIT51e-113A0A0A9RIT5_ARUDO; Uncharacterized protein
STRINGSb03g040970.11e-104(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26653786
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03970.13e-16G-box binding factor 4